Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.24□□□□□ -0.45
SVIPQ8NHG7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SVIPQ8NHG7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 AL357140.3-201ENST00000639753 1983 ntBASIC12.22□□□□□ -0.45
SVIPQ8NHG7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.22□□□□□ -0.45
SVIPQ8NHG7 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SVIPQ8NHG7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 REXO1L2P-201ENST00000425429 2069 ntBASIC12.21□□□□□ -0.45
SVIPQ8NHG7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SVIPQ8NHG7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SVIPQ8NHG7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SVIPQ8NHG7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms