Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.92■□□□□ 0.94
BEST2Q8NFU1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 RBM17P1-201ENST00000453646 1190 ntBASIC20.91■□□□□ 0.94
BEST2Q8NFU1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 AL160286.2-201ENST00000567150 934 ntBASIC20.91■□□□□ 0.94
BEST2Q8NFU1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 LINC01023-201ENST00000606054 436 ntBASIC20.91■□□□□ 0.94
BEST2Q8NFU1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 AC012306.2-201ENST00000609350 630 ntBASIC20.91■□□□□ 0.94
BEST2Q8NFU1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.91■□□□□ 0.94
BEST2Q8NFU1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 B3GAT3P1-201ENST00000471720 806 ntBASIC20.9■□□□□ 0.94
BEST2Q8NFU1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.9■□□□□ 0.94
BEST2Q8NFU1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BEST2Q8NFU1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
BEST2Q8NFU1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
BEST2Q8NFU1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BEST2Q8NFU1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.89■□□□□ 0.94
BEST2Q8NFU1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
BEST2Q8NFU1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BEST2Q8NFU1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 MESTP1-201ENST00000404287 994 ntBASIC20.89■□□□□ 0.93
BEST2Q8NFU1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 AC011506.1-201ENST00000474329 610 ntBASIC20.89■□□□□ 0.93
BEST2Q8NFU1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 AC097493.4-201ENST00000641197 219 ntBASIC20.89■□□□□ 0.93
BEST2Q8NFU1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BEST2Q8NFU1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.88■□□□□ 0.93
BEST2Q8NFU1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms