Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 PGM5P4-201ENST00000421970 445 ntBASIC18.82■□□□□ 0.6
HIPK4Q8NE63 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 AC009237.14-201ENST00000609975 1594 ntBASIC18.81■□□□□ 0.6
HIPK4Q8NE63 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK4Q8NE63 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 UBE2DNL-204ENST00000602536 740 ntBASIC18.8■□□□□ 0.6
HIPK4Q8NE63 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK4Q8NE63 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms