Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RNF169Q8NCN4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF169Q8NCN4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 AC092667.1-201ENST00000434301 2586 ntBASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 AP000692.2-201ENST00000608391 879 ntBASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 LINC01465-201ENST00000408887 1940 ntBASIC21.13■□□□□ 0.97
RNF169Q8NCN4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF169Q8NCN4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.12■□□□□ 0.97
RNF169Q8NCN4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 MFAP1P1-201ENST00000442257 1255 ntBASIC21.12■□□□□ 0.97
RNF169Q8NCN4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 AC073508.3-201ENST00000619697 1419 ntBASIC21.12■□□□□ 0.97
RNF169Q8NCN4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF169Q8NCN4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.11■□□□□ 0.97
RNF169Q8NCN4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 AP005212.1-201ENST00000581547 1997 ntBASIC21.11■□□□□ 0.97
RNF169Q8NCN4 TSPY14P-201ENST00000303979 915 ntBASIC21.11■□□□□ 0.97
RNF169Q8NCN4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RNF169Q8NCN4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 AC091390.4-202ENST00000476426 537 ntBASIC21.1■□□□□ 0.97
RNF169Q8NCN4 AC128688.1-201ENST00000487626 519 ntBASIC21.1■□□□□ 0.97
RNF169Q8NCN4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms