Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NPAP1P7-201ENST00000613027 823 ntBASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 AP005212.1-201ENST00000581547 1997 ntBASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CLEC4GP1-201ENST00000596555 870 ntBASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL27A1Q8IZC6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 MIR4674-201ENST00000582457 87 ntBASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL27A1Q8IZC6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 AC020907.5-201ENST00000624372 1936 ntBASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL27A1Q8IZC6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms