Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.04■■□□□ 1.44
DDX60Q8IY21 AC139887.4-201ENST00000607877 719 ntBASIC24.04■■□□□ 1.44
DDX60Q8IY21 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX60Q8IY21 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.03■■□□□ 1.44
DDX60Q8IY21 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.03■■□□□ 1.44
DDX60Q8IY21 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 AL391422.3-201ENST00000603791 2761 ntBASIC24.03■■□□□ 1.44
DDX60Q8IY21 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.03■■□□□ 1.44
DDX60Q8IY21 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
DDX60Q8IY21 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
DDX60Q8IY21 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
DDX60Q8IY21 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX60Q8IY21 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX60Q8IY21 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX60Q8IY21 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX60Q8IY21 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX60Q8IY21 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX60Q8IY21 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.02■■□□□ 1.44
DDX60Q8IY21 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 AL023973.1-201ENST00000624619 620 ntBASIC24.01■■□□□ 1.43
DDX60Q8IY21 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX60Q8IY21 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX60Q8IY21 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX60Q8IY21 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX60Q8IY21 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX60Q8IY21 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX60Q8IY21 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.01■■□□□ 1.43
DDX60Q8IY21 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 PRSS44-201ENST00000515154 1146 ntBASIC24.01■■□□□ 1.43
DDX60Q8IY21 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX60Q8IY21 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24■■□□□ 1.43
DDX60Q8IY21 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX60Q8IY21 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
DDX60Q8IY21 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX60Q8IY21 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX60Q8IY21 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
DDX60Q8IY21 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX60Q8IY21 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
DDX60Q8IY21 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24■■□□□ 1.43
DDX60Q8IY21 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24■■□□□ 1.43
DDX60Q8IY21 AC092667.1-201ENST00000434301 2586 ntBASIC24■■□□□ 1.43
DDX60Q8IY21 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 COX11P1-201ENST00000489116 835 ntBASIC23.99■■□□□ 1.43
DDX60Q8IY21 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 AL441883.1-201ENST00000566170 1045 ntBASIC23.99■■□□□ 1.43
DDX60Q8IY21 LINC01238-205ENST00000567549 1107 ntBASIC23.99■■□□□ 1.43
DDX60Q8IY21 AL358472.4-201ENST00000633140 710 ntBASIC23.99■■□□□ 1.43
DDX60Q8IY21 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.99■■□□□ 1.43
DDX60Q8IY21 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX60Q8IY21 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms