Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C9orf40Q8IXQ3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 AC026471.5-201ENST00000615068 467 ntBASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.96■□□□□ 0.47
C9orf40Q8IXQ3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
C9orf40Q8IXQ3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
C9orf40Q8IXQ3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 ZNF815P-204ENST00000434898 1737 ntBASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 MIR4785-201ENST00000585005 73 ntBASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
C9orf40Q8IXQ3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 NUDT16P1-203ENST00000513809 620 ntBASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AL160286.2-201ENST00000567150 934 ntBASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AC026271.3-201ENST00000571884 352 ntBASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AC131212.4-201ENST00000623606 975 ntBASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AL031985.4-201ENST00000642138 673 ntBASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 AC104417.2-201ENST00000562989 1793 ntBASIC17.94■□□□□ 0.46
C9orf40Q8IXQ3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 AL355355.2-201ENST00000442321 338 ntBASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 Z85996.1-201ENST00000494644 937 ntBASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 AP003071.4-201ENST00000562276 1284 ntBASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C9orf40Q8IXQ3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms