Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 AC006128.1-201ENST00000624704 1661 ntBASIC18.53■□□□□ 0.56
RAB43Q86YS6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB43Q86YS6 PCDHAC2-203ENST00000615316 3011 ntBASIC18.52■□□□□ 0.56
RAB43Q86YS6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB43Q86YS6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB43Q86YS6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB43Q86YS6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB43Q86YS6 KRT16P6-202ENST00000425692 1426 ntBASIC18.52■□□□□ 0.56
RAB43Q86YS6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB43Q86YS6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB43Q86YS6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.52■□□□□ 0.56
RAB43Q86YS6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB43Q86YS6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB43Q86YS6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.52■□□□□ 0.55
RAB43Q86YS6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB43Q86YS6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB43Q86YS6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RAB43Q86YS6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.52■□□□□ 0.55
RAB43Q86YS6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB43Q86YS6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 DPP3P2-201ENST00000416030 1696 ntBASIC18.51■□□□□ 0.55
RAB43Q86YS6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 NUDT16P1-203ENST00000513809 620 ntBASIC18.51■□□□□ 0.55
RAB43Q86YS6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB43Q86YS6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAB43Q86YS6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 MMP23A-201ENST00000234610 1017 ntBASIC18.5■□□□□ 0.55
RAB43Q86YS6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 KSR1P1-201ENST00000446298 240 ntBASIC18.5■□□□□ 0.55
RAB43Q86YS6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 AC018445.3-201ENST00000624177 1945 ntBASIC18.5■□□□□ 0.55
RAB43Q86YS6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB43Q86YS6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAB43Q86YS6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 AP006587.1-201ENST00000534129 1502 ntBASIC18.49■□□□□ 0.55
RAB43Q86YS6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 NIFKP9-201ENST00000419265 221 ntBASIC18.49■□□□□ 0.55
RAB43Q86YS6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 KRT18P21-201ENST00000515767 1272 ntBASIC18.49■□□□□ 0.55
RAB43Q86YS6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB43Q86YS6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB43Q86YS6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms