Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 KRT18P11-201ENST00000435214 1283 ntBASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 AC079598.2-202ENST00000546624 1451 ntBASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM1Q86UE6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 AC093525.10-201ENST00000625130 1569 ntBASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ZNF815P-204ENST00000434898 1737 ntBASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 AC135050.7-201ENST00000624508 2218 ntBASIC16.84■□□□□ 0.29
LRRTM1Q86UE6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LRRTM1Q86UE6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.83■□□□□ 0.29
LRRTM1Q86UE6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
LRRTM1Q86UE6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRTM1Q86UE6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 DUX4L16-201ENST00000555130 1264 ntBASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRTM1Q86UE6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 WIZP1-201ENST00000531444 2299 ntBASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRTM1Q86UE6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms