Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP1BQ7LBR1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PTBP1P-201ENST00000554374 1601 ntBASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 AC093827.2-201ENST00000512654 315 ntBASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP1BQ7LBR1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 AP005212.1-201ENST00000581547 1997 ntBASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 KRASP1-201ENST00000407852 552 ntBASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP1BQ7LBR1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 MIR718-201ENST00000390190 70 ntBASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 AC073314.1-201ENST00000568729 2216 ntBASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 AC110285.5-201ENST00000611501 352 ntBASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP1BQ7LBR1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms