Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 AL390955.1-201ENST00000428694 934 ntBASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3CQ6NXT2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
H3F3CQ6NXT2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 NAPSB-206ENST00000562112 1266 ntBASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 AP000692.2-201ENST00000608391 879 ntBASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 AC010947.1-201ENST00000623454 693 ntBASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 RCC2P6-201ENST00000526625 1557 ntBASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.95■□□□□ 0.46
H3F3CQ6NXT2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AC004951.3-201ENST00000418645 1148 ntBASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H3F3CQ6NXT2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 RCN1P1-201ENST00000400413 996 ntBASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 Z85996.1-201ENST00000494644 937 ntBASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 AC097488.1-201ENST00000507834 756 ntBASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.93■□□□□ 0.46
H3F3CQ6NXT2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 LINC01568-207ENST00000641790 1380 ntBASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 AC099778.1-201ENST00000568593 1911 ntBASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3CQ6NXT2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms