Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.58■□□□□ 0.89
VARS2Q5ST30 FAM87A-204ENST00000613235 858 ntBASIC20.58■□□□□ 0.89
VARS2Q5ST30 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARS2Q5ST30 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARS2Q5ST30 TCF3P1-201ENST00000423021 1937 ntBASIC20.58■□□□□ 0.88
VARS2Q5ST30 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARS2Q5ST30 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARS2Q5ST30 KRT8P41-201ENST00000533985 1514 ntBASIC20.58■□□□□ 0.88
VARS2Q5ST30 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.58■□□□□ 0.88
VARS2Q5ST30 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
VARS2Q5ST30 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VARS2Q5ST30 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.57■□□□□ 0.88
VARS2Q5ST30 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 LIN28AP1-201ENST00000429574 405 ntBASIC20.56■□□□□ 0.88
VARS2Q5ST30 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VARS2Q5ST30 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.56■□□□□ 0.88
VARS2Q5ST30 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.55■□□□□ 0.88
VARS2Q5ST30 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.55■□□□□ 0.88
VARS2Q5ST30 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.55■□□□□ 0.88
VARS2Q5ST30 AC116562.4-202ENST00000641738 218 ntBASIC20.55■□□□□ 0.88
VARS2Q5ST30 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
VARS2Q5ST30 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
VARS2Q5ST30 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VARS2Q5ST30 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.55■□□□□ 0.88
VARS2Q5ST30 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARS2Q5ST30 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARS2Q5ST30 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.54■□□□□ 0.88
VARS2Q5ST30 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARS2Q5ST30 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VARS2Q5ST30 SLC25A1P2-201ENST00000430693 912 ntBASIC20.54■□□□□ 0.88
VARS2Q5ST30 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 CCR12P-201ENST00000446203 998 ntBASIC20.54■□□□□ 0.88
VARS2Q5ST30 ATP5G1P1-201ENST00000448724 379 ntBASIC20.54■□□□□ 0.88
VARS2Q5ST30 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARS2Q5ST30 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.54■□□□□ 0.88
VARS2Q5ST30 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VARS2Q5ST30 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms