Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNFT1Q5M7Z0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 LINC01006-201ENST00000333319 2292 ntBASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 WWOX-216ENST00000569818 525 ntBASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 NTF6B-201ENST00000591913 560 ntBASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 AL023803.3-201ENST00000615559 522 ntBASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 AC116562.4-202ENST00000641738 218 ntBASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNFT1Q5M7Z0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 SLC25A1P2-201ENST00000430693 912 ntBASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 AC007663.1-201ENST00000438948 1240 ntBASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNFT1Q5M7Z0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 HMGA1P5-201ENST00000412453 271 ntBASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNFT1Q5M7Z0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms