Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 AC007322.3-201ENST00000426526 701 ntBASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC6LQ2NKX8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 AC091799.1-201ENST00000422823 811 ntBASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 AC120498.10-201ENST00000621827 505 ntBASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 KRT8P17-201ENST00000453110 1448 ntBASIC20.53■□□□□ 0.88
ERCC6LQ2NKX8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.52■□□□□ 0.88
ERCC6LQ2NKX8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.52■□□□□ 0.87
ERCC6LQ2NKX8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 ABALON-201ENST00000629058 1903 ntBASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 AC138907.5-202ENST00000569484 235 ntBASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms