Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 RASA4DP-201ENST00000460726 1199 ntBASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RSPO4Q2I0M5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 AC116351.2-201ENST00000606540 1585 ntBASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 KRT8P17-201ENST00000453110 1448 ntBASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 AC022898.2-201ENST00000616822 1312 ntBASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 Z85996.1-201ENST00000494644 937 ntBASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO4Q2I0M5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 AC092597.1-201ENST00000487352 616 ntBASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 AL121912.1-201ENST00000603683 238 ntBASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO4Q2I0M5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.83■□□□□ 0.61
RSPO4Q2I0M5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RSPO4Q2I0M5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RSPO4Q2I0M5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.83■□□□□ 0.61
RSPO4Q2I0M5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.83■□□□□ 0.61
RSPO4Q2I0M5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 KRT18P31-201ENST00000506277 1292 ntBASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 FOSL1P1-201ENST00000511041 816 ntBASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms