Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC080038.1-201ENST00000611274 1154 ntBASIC14.85□□□□□ -0.03
HIST1H1AQ02539 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 TREX1-205ENST00000625293 1783 ntBASIC14.85□□□□□ -0.03
HIST1H1AQ02539 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 KRT17P1-201ENST00000399211 1546 ntBASIC14.84□□□□□ -0.03
HIST1H1AQ02539 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 C2orf69P4-201ENST00000565394 541 ntBASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H1AQ02539 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H1AQ02539 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H1AQ02539 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.83□□□□□ -0.03
HIST1H1AQ02539 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H1AQ02539 AC093484.2-201ENST00000580996 2166 ntBASIC14.83□□□□□ -0.04
HIST1H1AQ02539 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 AL512625.2-201ENST00000417533 625 ntBASIC14.82□□□□□ -0.04
HIST1H1AQ02539 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 IKBKGP1-201ENST00000612193 1073 ntBASIC14.82□□□□□ -0.04
HIST1H1AQ02539 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 AC073111.5-205ENST00000641717 521 ntBASIC14.82□□□□□ -0.04
HIST1H1AQ02539 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H1AQ02539 MKRN4P-201ENST00000444706 1521 ntBASIC14.82□□□□□ -0.04
HIST1H1AQ02539 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 AC009237.14-201ENST00000609975 1594 ntBASIC14.81□□□□□ -0.04
HIST1H1AQ02539 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms