Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCL20P78556 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 KRT16P3-201ENST00000439127 1283 ntBASIC15.29■□□□□ 0.04
CCL20P78556 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.29■□□□□ 0.04
CCL20P78556 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.29■□□□□ 0.04
CCL20P78556 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CCL20P78556 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCL20P78556 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCL20P78556 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL20P78556 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCL20P78556 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL20P78556 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCL20P78556 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL20P78556 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
CCL20P78556 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL20P78556 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL20P78556 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 FAM21FP-204ENST00000608637 956 ntBASIC15.28■□□□□ 0.04
CCL20P78556 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCL20P78556 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCL20P78556 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCL20P78556 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CCL20P78556 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CCL20P78556 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL20P78556 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCL20P78556 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCL20P78556 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCL20P78556 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.27■□□□□ 0.04
CCL20P78556 BX842568.3-201ENST00000418104 571 ntBASIC15.27■□□□□ 0.04
CCL20P78556 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCL20P78556 PTBP1P-201ENST00000554374 1601 ntBASIC15.27■□□□□ 0.03
CCL20P78556 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL20P78556 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL20P78556 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCL20P78556 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL20P78556 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL20P78556 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms