Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LSM6P62312 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LSM6P62312 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.06■□□□□ 0.32
LSM6P62312 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.06■□□□□ 0.32
LSM6P62312 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LSM6P62312 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.06■□□□□ 0.32
LSM6P62312 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LSM6P62312 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSM6P62312 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.06■□□□□ 0.32
LSM6P62312 AC018445.3-201ENST00000624177 1945 ntBASIC17.06■□□□□ 0.32
LSM6P62312 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LSM6P62312 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LSM6P62312 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LSM6P62312 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.05■□□□□ 0.32
LSM6P62312 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.05■□□□□ 0.32
LSM6P62312 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.05■□□□□ 0.32
LSM6P62312 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.05■□□□□ 0.32
LSM6P62312 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.05■□□□□ 0.32
LSM6P62312 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
LSM6P62312 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSM6P62312 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LSM6P62312 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
LSM6P62312 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LSM6P62312 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LSM6P62312 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LSM6P62312 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LSM6P62312 AC104417.2-201ENST00000562989 1793 ntBASIC17.04■□□□□ 0.32
LSM6P62312 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 NBPF21P-201ENST00000425093 1451 ntBASIC17.04■□□□□ 0.32
LSM6P62312 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
LSM6P62312 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LSM6P62312 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LSM6P62312 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSM6P62312 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.03■□□□□ 0.32
LSM6P62312 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LSM6P62312 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM6P62312 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.03■□□□□ 0.32
LSM6P62312 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.03■□□□□ 0.32
LSM6P62312 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.03■□□□□ 0.32
LSM6P62312 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM6P62312 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms