Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.96■□□□□ 0.3
SEC61A1P61619 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.96■□□□□ 0.3
SEC61A1P61619 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.96■□□□□ 0.3
SEC61A1P61619 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SEC61A1P61619 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SEC61A1P61619 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.95■□□□□ 0.3
SEC61A1P61619 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.95■□□□□ 0.3
SEC61A1P61619 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.95■□□□□ 0.3
SEC61A1P61619 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.95■□□□□ 0.3
SEC61A1P61619 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.95■□□□□ 0.3
SEC61A1P61619 POU5F1P3-201ENST00000428824 1078 ntBASIC16.95■□□□□ 0.3
SEC61A1P61619 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.95■□□□□ 0.3
SEC61A1P61619 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
SEC61A1P61619 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.95■□□□□ 0.3
SEC61A1P61619 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.95■□□□□ 0.3
SEC61A1P61619 TMEM191A-211ENST00000637163 1067 ntBASIC16.95■□□□□ 0.3
SEC61A1P61619 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.95■□□□□ 0.3
SEC61A1P61619 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
SEC61A1P61619 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
SEC61A1P61619 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 AL049812.1-201ENST00000432563 2267 ntBASIC16.95■□□□□ 0.3
SEC61A1P61619 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.95■□□□□ 0.3
SEC61A1P61619 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61A1P61619 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.95■□□□□ 0.3
SEC61A1P61619 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SEC61A1P61619 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SEC61A1P61619 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.94■□□□□ 0.3
SEC61A1P61619 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.94■□□□□ 0.3
SEC61A1P61619 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SEC61A1P61619 AC093484.2-201ENST00000580996 2166 ntBASIC16.94■□□□□ 0.3
SEC61A1P61619 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SEC61A1P61619 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SEC61A1P61619 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.93■□□□□ 0.3
SEC61A1P61619 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.93■□□□□ 0.3
SEC61A1P61619 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 ESRRAP1-201ENST00000400596 1257 ntBASIC16.93■□□□□ 0.3
SEC61A1P61619 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.93■□□□□ 0.3
SEC61A1P61619 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SEC61A1P61619 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.93■□□□□ 0.3
SEC61A1P61619 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 AL356652.1-201ENST00000615962 565 ntBASIC16.93■□□□□ 0.3
SEC61A1P61619 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms