Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH13P55290 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDH13P55290 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH13P55290 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDH13P55290 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH13P55290 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH13P55290 RPS2P52-201ENST00000469610 820 ntBASIC18.98■□□□□ 0.63
CDH13P55290 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH13P55290 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CDH13P55290 AL049812.1-201ENST00000432563 2267 ntBASIC18.98■□□□□ 0.63
CDH13P55290 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH13P55290 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH13P55290 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH13P55290 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH13P55290 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.97■□□□□ 0.63
CDH13P55290 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CDH13P55290 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH13P55290 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDH13P55290 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDH13P55290 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH13P55290 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH13P55290 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDH13P55290 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH13P55290 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH13P55290 AL161938.1-201ENST00000569833 2180 ntBASIC18.96■□□□□ 0.63
CDH13P55290 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDH13P55290 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 TEX21P-204ENST00000641479 1693 ntBASIC18.96■□□□□ 0.63
CDH13P55290 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 TSPY6P-201ENST00000448518 926 ntBASIC18.96■□□□□ 0.63
CDH13P55290 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH13P55290 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDH13P55290 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDH13P55290 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH13P55290 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDH13P55290 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH13P55290 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH13P55290 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH13P55290 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 SLC29A4P1-201ENST00000398760 971 ntBASIC18.95■□□□□ 0.62
CDH13P55290 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.95■□□□□ 0.62
CDH13P55290 NCF1B-203ENST00000435988 1254 ntBASIC18.95■□□□□ 0.62
CDH13P55290 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.95■□□□□ 0.62
CDH13P55290 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH13P55290 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH13P55290 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms