Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.36■□□□□ 0.53
NR1H2P55055 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.36■□□□□ 0.53
NR1H2P55055 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
NR1H2P55055 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NR1H2P55055 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NR1H2P55055 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.35■□□□□ 0.53
NR1H2P55055 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
NR1H2P55055 POU5F1P4-201ENST00000413175 1085 ntBASIC18.35■□□□□ 0.53
NR1H2P55055 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.35■□□□□ 0.53
NR1H2P55055 AF201337.1-201ENST00000520239 748 ntBASIC18.35■□□□□ 0.53
NR1H2P55055 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.35■□□□□ 0.53
NR1H2P55055 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.35■□□□□ 0.53
NR1H2P55055 SLC7A5P2-201ENST00000553010 536 ntBASIC18.35■□□□□ 0.53
NR1H2P55055 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.35■□□□□ 0.53
NR1H2P55055 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NR1H2P55055 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
NR1H2P55055 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NR1H2P55055 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
NR1H2P55055 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.35■□□□□ 0.53
NR1H2P55055 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NR1H2P55055 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H2P55055 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NR1H2P55055 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NR1H2P55055 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 CNN2P6-201ENST00000439038 900 ntBASIC18.34■□□□□ 0.53
NR1H2P55055 TERF1P5-201ENST00000477545 1207 ntBASIC18.34■□□□□ 0.53
NR1H2P55055 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.34■□□□□ 0.53
NR1H2P55055 AC133552.2-202ENST00000575694 574 ntBASIC18.34■□□□□ 0.53
NR1H2P55055 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.34■□□□□ 0.53
NR1H2P55055 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NR1H2P55055 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NR1H2P55055 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.34■□□□□ 0.53
NR1H2P55055 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NR1H2P55055 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H2P55055 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H2P55055 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H2P55055 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
NR1H2P55055 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NR1H2P55055 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NR1H2P55055 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
NR1H2P55055 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H2P55055 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H2P55055 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H2P55055 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.33■□□□□ 0.52
NR1H2P55055 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.33■□□□□ 0.52
NR1H2P55055 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.33■□□□□ 0.52
NR1H2P55055 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NR1H2P55055 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H2P55055 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NR1H2P55055 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
NR1H2P55055 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.32■□□□□ 0.52
NR1H2P55055 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 AC068880.1-201ENST00000507289 2297 ntBASIC18.32■□□□□ 0.52
NR1H2P55055 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.32■□□□□ 0.52
NR1H2P55055 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms