Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.03■□□□□ 0.8
PMS2P54278 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.03■□□□□ 0.8
PMS2P54278 DUX4L16-201ENST00000555130 1264 ntBASIC20.03■□□□□ 0.8
PMS2P54278 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.03■□□□□ 0.8
PMS2P54278 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.03■□□□□ 0.8
PMS2P54278 UBE2DNL-204ENST00000602536 740 ntBASIC20.03■□□□□ 0.8
PMS2P54278 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 AC009113.1-201ENST00000570267 2443 ntBASIC20.03■□□□□ 0.8
PMS2P54278 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PMS2P54278 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PMS2P54278 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.02■□□□□ 0.8
PMS2P54278 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PMS2P54278 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.02■□□□□ 0.8
PMS2P54278 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PMS2P54278 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PMS2P54278 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.02■□□□□ 0.8
PMS2P54278 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS2P54278 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PMS2P54278 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PMS2P54278 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.79
PMS2P54278 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PMS2P54278 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PMS2P54278 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PMS2P54278 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PMS2P54278 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PMS2P54278 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS2P54278 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS2P54278 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS2P54278 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.01■□□□□ 0.79
PMS2P54278 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.01■□□□□ 0.79
PMS2P54278 MYCNOS-205ENST00000641950 531 ntBASIC20.01■□□□□ 0.79
PMS2P54278 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.01■□□□□ 0.79
PMS2P54278 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PMS2P54278 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PMS2P54278 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20■□□□□ 0.79
PMS2P54278 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PMS2P54278 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20■□□□□ 0.79
PMS2P54278 HLA-G-202ENST00000376815 851 ntBASIC20■□□□□ 0.79
PMS2P54278 HLA-G-203ENST00000376818 1127 ntBASIC20■□□□□ 0.79
PMS2P54278 GUSBP6-202ENST00000438529 1198 ntBASIC20■□□□□ 0.79
PMS2P54278 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PMS2P54278 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20■□□□□ 0.79
PMS2P54278 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
PMS2P54278 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20■□□□□ 0.79
PMS2P54278 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
PMS2P54278 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PMS2P54278 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PMS2P54278 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PMS2P54278 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS2P54278 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS2P54278 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS2P54278 TERF1P5-201ENST00000477545 1207 ntBASIC19.99■□□□□ 0.79
PMS2P54278 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS2P54278 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.99■□□□□ 0.79
PMS2P54278 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS2P54278 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS2P54278 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS2P54278 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms