Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22■■□□□ 1.11
USP11P51784 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USP11P51784 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22■■□□□ 1.11
USP11P51784 TSPY7P-201ENST00000431358 1114 ntBASIC22■■□□□ 1.11
USP11P51784 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22■■□□□ 1.11
USP11P51784 NUDT16P1-203ENST00000513809 620 ntBASIC22■■□□□ 1.11
USP11P51784 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22■■□□□ 1.11
USP11P51784 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22■■□□□ 1.11
USP11P51784 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
USP11P51784 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22■■□□□ 1.11
USP11P51784 ABBA01031674.1-201ENST00000635145 728 ntBASIC22■■□□□ 1.11
USP11P51784 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
USP11P51784 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USP11P51784 KRT17P2-201ENST00000300992 1314 ntBASIC22■■□□□ 1.11
USP11P51784 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USP11P51784 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 AC104417.2-201ENST00000562989 1793 ntBASIC21.99■■□□□ 1.11
USP11P51784 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.99■■□□□ 1.11
USP11P51784 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.99■■□□□ 1.11
USP11P51784 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.99■■□□□ 1.11
USP11P51784 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.99■■□□□ 1.11
USP11P51784 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.99■■□□□ 1.11
USP11P51784 AC116562.2-201ENST00000507042 360 ntBASIC21.99■■□□□ 1.11
USP11P51784 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.99■■□□□ 1.11
USP11P51784 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.99■■□□□ 1.11
USP11P51784 MIR4785-201ENST00000585005 73 ntBASIC21.99■■□□□ 1.11
USP11P51784 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.99■■□□□ 1.11
USP11P51784 AC026471.5-201ENST00000615068 467 ntBASIC21.99■■□□□ 1.11
USP11P51784 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP11P51784 AL158211.5-201ENST00000623583 2518 ntBASIC21.99■■□□□ 1.11
USP11P51784 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP11P51784 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP11P51784 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
USP11P51784 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
USP11P51784 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP11P51784 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
USP11P51784 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.98■■□□□ 1.11
USP11P51784 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.98■■□□□ 1.11
USP11P51784 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP11P51784 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
USP11P51784 AL355355.2-201ENST00000442321 338 ntBASIC21.98■■□□□ 1.11
USP11P51784 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.98■■□□□ 1.11
USP11P51784 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.98■■□□□ 1.11
USP11P51784 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
USP11P51784 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP11P51784 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP11P51784 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.98■■□□□ 1.11
USP11P51784 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
USP11P51784 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
USP11P51784 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
USP11P51784 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
USP11P51784 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.97■■□□□ 1.11
USP11P51784 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.97■■□□□ 1.11
USP11P51784 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.97■■□□□ 1.11
USP11P51784 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.97■■□□□ 1.11
USP11P51784 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.97■■□□□ 1.11
USP11P51784 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.97■■□□□ 1.11
USP11P51784 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.97■■□□□ 1.11
USP11P51784 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP11P51784 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
USP11P51784 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.96■■□□□ 1.11
USP11P51784 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
USP11P51784 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.96■■□□□ 1.11
USP11P51784 LINC01465-201ENST00000408887 1940 ntBASIC21.96■■□□□ 1.11
USP11P51784 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP11P51784 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP11P51784 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP11P51784 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP11P51784 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.96■■□□□ 1.11
USP11P51784 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.96■■□□□ 1.11
USP11P51784 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.96■■□□□ 1.11
USP11P51784 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.96■■□□□ 1.11
USP11P51784 Z85996.1-201ENST00000494644 937 ntBASIC21.96■■□□□ 1.11
USP11P51784 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.96■■□□□ 1.11
USP11P51784 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.96■■□□□ 1.11
USP11P51784 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.96■■□□□ 1.11
USP11P51784 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP11P51784 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
USP11P51784 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.95■■□□□ 1.11
USP11P51784 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
USP11P51784 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.95■■□□□ 1.1
USP11P51784 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.95■■□□□ 1.1
USP11P51784 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms