Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1P51610 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HCFC1P51610 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 HCG4P8-203ENST00000443049 980 ntBASIC16.96■□□□□ 0.31
HCFC1P51610 AP003041.3-201ENST00000527151 707 ntBASIC16.96■□□□□ 0.31
HCFC1P51610 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.96■□□□□ 0.31
HCFC1P51610 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1P51610 AL023803.3-201ENST00000615559 522 ntBASIC16.96■□□□□ 0.31
HCFC1P51610 AL121956.5-201ENST00000625261 221 ntBASIC16.96■□□□□ 0.31
HCFC1P51610 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 AC092720.2-201ENST00000602388 1665 ntBASIC16.96■□□□□ 0.31
HCFC1P51610 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1P51610 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.96■□□□□ 0.31
HCFC1P51610 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1P51610 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC1P51610 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.96■□□□□ 0.3
HCFC1P51610 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.96■□□□□ 0.3
HCFC1P51610 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
HCFC1P51610 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.96■□□□□ 0.3
HCFC1P51610 BX664615.1-201ENST00000443558 458 ntBASIC16.96■□□□□ 0.3
HCFC1P51610 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.96■□□□□ 0.3
HCFC1P51610 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.96■□□□□ 0.3
HCFC1P51610 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.96■□□□□ 0.3
HCFC1P51610 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
HCFC1P51610 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.96■□□□□ 0.3
HCFC1P51610 AC011558.1-201ENST00000623459 338 ntBASIC16.96■□□□□ 0.3
HCFC1P51610 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.96■□□□□ 0.3
HCFC1P51610 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC1P51610 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC1P51610 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC1P51610 AP001271.2-201ENST00000624018 1556 ntBASIC16.95■□□□□ 0.3
HCFC1P51610 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HCFC1P51610 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 AP005212.1-201ENST00000581547 1997 ntBASIC16.95■□□□□ 0.3
HCFC1P51610 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC1P51610 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1P51610 AC112907.2-201ENST00000448639 330 ntBASIC16.95■□□□□ 0.3
HCFC1P51610 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
HCFC1P51610 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1P51610 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1P51610 AC130371.2-201ENST00000619443 611 ntBASIC16.95■□□□□ 0.3
HCFC1P51610 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1P51610 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HCFC1P51610 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1P51610 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1P51610 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1P51610 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1P51610 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC1P51610 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1P51610 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1P51610 AC008040.2-201ENST00000461049 708 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 AC093458.2-201ENST00000623150 629 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 AL023973.1-201ENST00000624619 620 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 AC073314.1-201ENST00000568729 2216 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1P51610 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1P51610 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1P51610 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1P51610 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1P51610 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1P51610 SLC25A1P2-201ENST00000430693 912 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 AC092647.4-201ENST00000457211 535 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 AL353719.1-201ENST00000566847 864 ntBASIC16.94■□□□□ 0.3
HCFC1P51610 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.94■□□□□ 0.3
HCFC1P51610 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HCFC1P51610 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1P51610 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1P51610 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1P51610 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.93■□□□□ 0.3
HCFC1P51610 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms