Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF144AP50876 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RNF144AP50876 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 Z82202.1-201ENST00000623446 1880 ntBASIC18.03■□□□□ 0.48
RNF144AP50876 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF144AP50876 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNF144AP50876 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF144AP50876 AP003097.1-201ENST00000530657 1135 ntBASIC18.03■□□□□ 0.48
RNF144AP50876 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF144AP50876 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF144AP50876 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF144AP50876 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNF144AP50876 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF144AP50876 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF144AP50876 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RNF144AP50876 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RNF144AP50876 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF144AP50876 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF144AP50876 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF144AP50876 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF144AP50876 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF144AP50876 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF144AP50876 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF144AP50876 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
RNF144AP50876 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF144AP50876 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF144AP50876 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF144AP50876 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF144AP50876 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF144AP50876 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF144AP50876 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RNF144AP50876 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF144AP50876 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF144AP50876 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF144AP50876 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF144AP50876 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF144AP50876 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF144AP50876 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF144AP50876 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF144AP50876 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF144AP50876 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF144AP50876 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RNF144AP50876 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF144AP50876 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18■□□□□ 0.47
RNF144AP50876 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18■□□□□ 0.47
RNF144AP50876 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RNF144AP50876 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF144AP50876 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms