Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK7P50613 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDK7P50613 AC026396.1-201ENST00000419388 421 ntBASIC21.5■■□□□ 1.03
CDK7P50613 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK7P50613 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK7P50613 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.5■■□□□ 1.03
CDK7P50613 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 AL160286.2-201ENST00000567150 934 ntBASIC21.5■■□□□ 1.03
CDK7P50613 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK7P50613 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDK7P50613 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK7P50613 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CDK7P50613 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CDK7P50613 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK7P50613 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CDK7P50613 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK7P50613 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK7P50613 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK7P50613 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
CDK7P50613 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK7P50613 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK7P50613 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK7P50613 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 AP003041.3-201ENST00000527151 707 ntBASIC21.48■■□□□ 1.03
CDK7P50613 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 AL136038.3-201ENST00000561909 1096 ntBASIC21.48■■□□□ 1.03
CDK7P50613 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK7P50613 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK7P50613 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDK7P50613 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CDK7P50613 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK7P50613 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK7P50613 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CDK7P50613 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CDK7P50613 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.47■■□□□ 1.03
CDK7P50613 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK7P50613 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK7P50613 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
CDK7P50613 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK7P50613 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK7P50613 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK7P50613 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDK7P50613 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK7P50613 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDK7P50613 HCG4P8-203ENST00000443049 980 ntBASIC21.46■■□□□ 1.03
CDK7P50613 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.46■■□□□ 1.03
CDK7P50613 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.46■■□□□ 1.03
CDK7P50613 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.46■■□□□ 1.03
CDK7P50613 CKBP1-201ENST00000565489 1086 ntBASIC21.46■■□□□ 1.03
CDK7P50613 CLEC4GP1-201ENST00000596555 870 ntBASIC21.46■■□□□ 1.03
CDK7P50613 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.46■■□□□ 1.03
CDK7P50613 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.46■■□□□ 1.03
CDK7P50613 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CDK7P50613 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDK7P50613 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK7P50613 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK7P50613 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDK7P50613 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
CDK7P50613 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CDK7P50613 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms