Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.76■□□□□ 0.43
RFC3P40938 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RFC3P40938 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RFC3P40938 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFC3P40938 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC3P40938 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC3P40938 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFC3P40938 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC3P40938 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC3P40938 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC3P40938 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC3P40938 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC3P40938 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 CYP2D8P-201ENST00000433633 1490 ntBASIC17.75■□□□□ 0.43
RFC3P40938 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC3P40938 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RFC3P40938 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RFC3P40938 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RFC3P40938 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC3P40938 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RFC3P40938 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 MESTP1-201ENST00000404287 994 ntBASIC17.75■□□□□ 0.43
RFC3P40938 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.75■□□□□ 0.43
RFC3P40938 AC004980.1-204ENST00000429707 299 ntBASIC17.75■□□□□ 0.43
RFC3P40938 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC3P40938 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 AC011506.1-201ENST00000474329 610 ntBASIC17.75■□□□□ 0.43
RFC3P40938 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC3P40938 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFC3P40938 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFC3P40938 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFC3P40938 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC3P40938 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.75■□□□□ 0.43
RFC3P40938 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC3P40938 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC3P40938 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC3P40938 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.74■□□□□ 0.43
RFC3P40938 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.74■□□□□ 0.43
RFC3P40938 RCN1P1-201ENST00000400413 996 ntBASIC17.74■□□□□ 0.43
RFC3P40938 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC3P40938 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC3P40938 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC3P40938 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFC3P40938 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC3P40938 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC3P40938 HLA-A-209ENST00000638375 975 ntBASIC17.74■□□□□ 0.43
RFC3P40938 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 LINC01521-201ENST00000504184 1943 ntBASIC17.74■□□□□ 0.43
RFC3P40938 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFC3P40938 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC3P40938 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RFC3P40938 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 GABARAPL3-202ENST00000624044 1851 ntBASIC17.73■□□□□ 0.43
RFC3P40938 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RFC3P40938 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 LINC01465-201ENST00000408887 1940 ntBASIC17.73■□□□□ 0.43
RFC3P40938 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.73■□□□□ 0.43
RFC3P40938 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 B3GAT3P1-201ENST00000471720 806 ntBASIC17.73■□□□□ 0.43
RFC3P40938 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
RFC3P40938 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.73■□□□□ 0.43
RFC3P40938 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.73■□□□□ 0.43
RFC3P40938 AC131212.4-201ENST00000623606 975 ntBASIC17.73■□□□□ 0.43
RFC3P40938 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms