Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RFC5P40937 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC5P40937 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC5P40937 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC5P40937 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.47■■□□□ 1.03
RFC5P40937 AC130371.2-201ENST00000619443 611 ntBASIC21.47■■□□□ 1.03
RFC5P40937 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RFC5P40937 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC5P40937 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC5P40937 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RFC5P40937 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.46■■□□□ 1.03
RFC5P40937 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RFC5P40937 AC087499.1-201ENST00000418141 1075 ntBASIC21.46■■□□□ 1.03
RFC5P40937 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC5P40937 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.46■■□□□ 1.03
RFC5P40937 AC011298.2-201ENST00000617989 482 ntBASIC21.46■■□□□ 1.03
RFC5P40937 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC5P40937 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RFC5P40937 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RFC5P40937 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
RFC5P40937 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC5P40937 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC5P40937 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFC5P40937 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RFC5P40937 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.45■■□□□ 1.03
RFC5P40937 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.45■■□□□ 1.03
RFC5P40937 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
RFC5P40937 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.45■■□□□ 1.02
RFC5P40937 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.45■■□□□ 1.02
RFC5P40937 FITM1-202ENST00000559294 800 ntBASIC21.45■■□□□ 1.02
RFC5P40937 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RFC5P40937 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.45■■□□□ 1.02
RFC5P40937 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.45■■□□□ 1.02
RFC5P40937 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.45■■□□□ 1.02
RFC5P40937 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.45■■□□□ 1.02
RFC5P40937 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.45■■□□□ 1.02
RFC5P40937 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFC5P40937 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
RFC5P40937 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.45■■□□□ 1.02
RFC5P40937 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RFC5P40937 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RFC5P40937 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 MIR1238-201ENST00000408483 83 ntBASIC21.44■■□□□ 1.02
RFC5P40937 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.44■■□□□ 1.02
RFC5P40937 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 AP000692.2-201ENST00000608391 879 ntBASIC21.44■■□□□ 1.02
RFC5P40937 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RFC5P40937 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFC5P40937 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RFC5P40937 LINC01465-201ENST00000408887 1940 ntBASIC21.43■■□□□ 1.02
RFC5P40937 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 AC211429.1-201ENST00000415277 523 ntBASIC21.43■■□□□ 1.02
RFC5P40937 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.43■■□□□ 1.02
RFC5P40937 AC091390.4-202ENST00000476426 537 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms