Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFC1P35251 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFC1P35251 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFC1P35251 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFC1P35251 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RFC1P35251 RNF165-205ENST00000588679 2904 ntBASIC20.46■□□□□ 0.87
RFC1P35251 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.46■□□□□ 0.87
RFC1P35251 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.46■□□□□ 0.87
RFC1P35251 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.46■□□□□ 0.87
RFC1P35251 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.46■□□□□ 0.87
RFC1P35251 KRT18P16-201ENST00000510337 1294 ntBASIC20.46■□□□□ 0.87
RFC1P35251 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.46■□□□□ 0.87
RFC1P35251 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.46■□□□□ 0.87
RFC1P35251 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.46■□□□□ 0.87
RFC1P35251 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
RFC1P35251 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RFC1P35251 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.46■□□□□ 0.87
RFC1P35251 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
RFC1P35251 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFC1P35251 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RFC1P35251 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.45■□□□□ 0.86
RFC1P35251 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.45■□□□□ 0.86
RFC1P35251 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.45■□□□□ 0.86
RFC1P35251 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.45■□□□□ 0.86
RFC1P35251 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.45■□□□□ 0.86
RFC1P35251 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RFC1P35251 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.45■□□□□ 0.86
RFC1P35251 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.45■□□□□ 0.86
RFC1P35251 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 AL032819.2-201ENST00000624543 2162 ntBASIC20.45■□□□□ 0.86
RFC1P35251 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.45■□□□□ 0.86
RFC1P35251 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFC1P35251 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RFC1P35251 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RFC1P35251 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.44■□□□□ 0.86
RFC1P35251 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RFC1P35251 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RFC1P35251 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.44■□□□□ 0.86
RFC1P35251 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.44■□□□□ 0.86
RFC1P35251 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.44■□□□□ 0.86
RFC1P35251 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
RFC1P35251 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFC1P35251 KRT8P8-201ENST00000434750 1448 ntBASIC20.44■□□□□ 0.86
RFC1P35251 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.44■□□□□ 0.86
RFC1P35251 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RFC1P35251 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RFC1P35251 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.43■□□□□ 0.86
RFC1P35251 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.43■□□□□ 0.86
RFC1P35251 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 PRKY-204ENST00000533551 1019 ntBASIC20.43■□□□□ 0.86
RFC1P35251 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.43■□□□□ 0.86
RFC1P35251 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
RFC1P35251 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RFC1P35251 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.43■□□□□ 0.86
RFC1P35251 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.43■□□□□ 0.86
RFC1P35251 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFC1P35251 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.43■□□□□ 0.86
RFC1P35251 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.42■□□□□ 0.86
RFC1P35251 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.42■□□□□ 0.86
RFC1P35251 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFC1P35251 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms