Protein–RNA interactions for Protein: P35222

CTNNB1, Catenin beta-1, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1P35222 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CTNNB1P35222 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNNB1P35222 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNNB1P35222 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNNB1P35222 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNNB1P35222 ZNF444P1-201ENST00000559497 298 ntBASIC20.65■□□□□ 0.9
CTNNB1P35222 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CTNNB1P35222 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNNB1P35222 AC083849.1-201ENST00000615227 514 ntBASIC20.65■□□□□ 0.9
CTNNB1P35222 AC012313.10-201ENST00000623509 926 ntBASIC20.65■□□□□ 0.9
CTNNB1P35222 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNNB1P35222 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNNB1P35222 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNB1P35222 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNB1P35222 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNB1P35222 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.64■□□□□ 0.9
CTNNB1P35222 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.64■□□□□ 0.9
CTNNB1P35222 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CTNNB1P35222 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.64■□□□□ 0.89
CTNNB1P35222 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.64■□□□□ 0.89
CTNNB1P35222 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNB1P35222 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.64■□□□□ 0.89
CTNNB1P35222 AP001271.2-201ENST00000624018 1556 ntBASIC20.63■□□□□ 0.89
CTNNB1P35222 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNNB1P35222 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTNNB1P35222 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.63■□□□□ 0.89
CTNNB1P35222 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNNB1P35222 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.63■□□□□ 0.89
CTNNB1P35222 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNNB1P35222 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNNB1P35222 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNNB1P35222 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNNB1P35222 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNB1P35222 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNNB1P35222 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 LINC01311-201ENST00000565162 1445 ntBASIC20.62■□□□□ 0.89
CTNNB1P35222 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTNNB1P35222 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNNB1P35222 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNNB1P35222 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
CTNNB1P35222 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNNB1P35222 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNNB1P35222 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNNB1P35222 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNNB1P35222 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNNB1P35222 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTNNB1P35222 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNB1P35222 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNNB1P35222 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNNB1P35222 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNNB1P35222 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.61■□□□□ 0.89
CTNNB1P35222 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CTNNB1P35222 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.61■□□□□ 0.89
CTNNB1P35222 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 GCSHP2-201ENST00000560971 527 ntBASIC20.61■□□□□ 0.89
CTNNB1P35222 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.61■□□□□ 0.89
CTNNB1P35222 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNB1P35222 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTNNB1P35222 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms