Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PRPH2P23942 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRPH2P23942 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPH2P23942 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.5■□□□□ 0.55
PRPH2P23942 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPH2P23942 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.5■□□□□ 0.55
PRPH2P23942 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.5■□□□□ 0.55
PRPH2P23942 AL138781.2-201ENST00000617896 1843 ntBASIC18.5■□□□□ 0.55
PRPH2P23942 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.5■□□□□ 0.55
PRPH2P23942 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRPH2P23942 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.5■□□□□ 0.55
PRPH2P23942 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.49■□□□□ 0.55
PRPH2P23942 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.49■□□□□ 0.55
PRPH2P23942 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.49■□□□□ 0.55
PRPH2P23942 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRPH2P23942 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRPH2P23942 AC104771.1-201ENST00000603335 964 ntBASIC18.49■□□□□ 0.55
PRPH2P23942 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.49■□□□□ 0.55
PRPH2P23942 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRPH2P23942 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRPH2P23942 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
PRPH2P23942 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRPH2P23942 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PRPH2P23942 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.48■□□□□ 0.55
PRPH2P23942 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 UNC93B4-201ENST00000505679 747 ntBASIC18.48■□□□□ 0.55
PRPH2P23942 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.48■□□□□ 0.55
PRPH2P23942 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.48■□□□□ 0.55
PRPH2P23942 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.48■□□□□ 0.55
PRPH2P23942 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRPH2P23942 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PRPH2P23942 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.48■□□□□ 0.55
PRPH2P23942 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 AL049812.1-201ENST00000432563 2267 ntBASIC18.48■□□□□ 0.55
PRPH2P23942 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.48■□□□□ 0.55
PRPH2P23942 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.48■□□□□ 0.55
PRPH2P23942 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRPH2P23942 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRPH2P23942 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
PRPH2P23942 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.47■□□□□ 0.55
PRPH2P23942 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 AC006333.2-201ENST00000607957 2099 ntBASIC18.47■□□□□ 0.55
PRPH2P23942 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PRPH2P23942 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.47■□□□□ 0.55
PRPH2P23942 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.47■□□□□ 0.55
PRPH2P23942 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.47■□□□□ 0.55
PRPH2P23942 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
PRPH2P23942 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.47■□□□□ 0.55
PRPH2P23942 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRPH2P23942 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms