Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFX1P22670 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFX1P22670 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFX1P22670 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RFX1P22670 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
RFX1P22670 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 AC087499.1-201ENST00000418141 1075 ntBASIC21.14■□□□□ 0.97
RFX1P22670 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.14■□□□□ 0.97
RFX1P22670 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.14■□□□□ 0.97
RFX1P22670 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.14■□□□□ 0.97
RFX1P22670 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.14■□□□□ 0.97
RFX1P22670 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.14■□□□□ 0.97
RFX1P22670 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RFX1P22670 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.14■□□□□ 0.97
RFX1P22670 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RFX1P22670 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX1P22670 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX1P22670 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.13■□□□□ 0.97
RFX1P22670 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.13■□□□□ 0.97
RFX1P22670 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RFX1P22670 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX1P22670 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX1P22670 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RFX1P22670 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RFX1P22670 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX1P22670 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX1P22670 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX1P22670 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.12■□□□□ 0.97
RFX1P22670 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX1P22670 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.12■□□□□ 0.97
RFX1P22670 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.12■□□□□ 0.97
RFX1P22670 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.12■□□□□ 0.97
RFX1P22670 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX1P22670 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.12■□□□□ 0.97
RFX1P22670 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.12■□□□□ 0.97
RFX1P22670 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RFX1P22670 AL121906.2-201ENST00000621597 723 ntBASIC21.12■□□□□ 0.97
RFX1P22670 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RFX1P22670 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RFX1P22670 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX1P22670 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX1P22670 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RFX1P22670 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.11■□□□□ 0.97
RFX1P22670 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
RFX1P22670 Z82202.1-201ENST00000623446 1880 ntBASIC21.11■□□□□ 0.97
RFX1P22670 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 BX323043.1-201ENST00000641006 1765 ntBASIC21.11■□□□□ 0.97
RFX1P22670 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.11■□□□□ 0.97
RFX1P22670 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.11■□□□□ 0.97
RFX1P22670 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.11■□□□□ 0.97
RFX1P22670 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.11■□□□□ 0.97
RFX1P22670 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RFX1P22670 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFX1P22670 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RFX1P22670 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RFX1P22670 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX1P22670 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX1P22670 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX1P22670 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RFX1P22670 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.1■□□□□ 0.97
RFX1P22670 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.1■□□□□ 0.97
RFX1P22670 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX1P22670 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.1■□□□□ 0.97
RFX1P22670 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.1■□□□□ 0.97
RFX1P22670 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 AC006557.6-201ENST00000623071 864 ntBASIC21.1■□□□□ 0.97
RFX1P22670 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.1■□□□□ 0.97
RFX1P22670 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms