Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BCKDHBP21953 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BCKDHBP21953 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.24■□□□□ 0.67
BCKDHBP21953 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.24■□□□□ 0.67
BCKDHBP21953 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.24■□□□□ 0.67
BCKDHBP21953 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.24■□□□□ 0.67
BCKDHBP21953 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.24■□□□□ 0.67
BCKDHBP21953 VENTXP5-201ENST00000523979 775 ntBASIC19.24■□□□□ 0.67
BCKDHBP21953 AC069148.1-201ENST00000608741 768 ntBASIC19.24■□□□□ 0.67
BCKDHBP21953 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.24■□□□□ 0.67
BCKDHBP21953 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.24■□□□□ 0.67
BCKDHBP21953 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.24■□□□□ 0.67
BCKDHBP21953 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BCKDHBP21953 AC026310.3-201ENST00000625186 2373 ntBASIC19.24■□□□□ 0.67
BCKDHBP21953 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHBP21953 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHBP21953 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BCKDHBP21953 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.23■□□□□ 0.67
BCKDHBP21953 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHBP21953 AC026396.1-201ENST00000419388 421 ntBASIC19.23■□□□□ 0.67
BCKDHBP21953 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.23■□□□□ 0.67
BCKDHBP21953 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHBP21953 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.23■□□□□ 0.67
BCKDHBP21953 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
BCKDHBP21953 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.23■□□□□ 0.67
BCKDHBP21953 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BCKDHBP21953 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHBP21953 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.23■□□□□ 0.67
BCKDHBP21953 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.23■□□□□ 0.67
BCKDHBP21953 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHBP21953 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 AC112907.2-201ENST00000448639 330 ntBASIC19.22■□□□□ 0.67
BCKDHBP21953 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 AC083849.1-201ENST00000615227 514 ntBASIC19.22■□□□□ 0.67
BCKDHBP21953 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.22■□□□□ 0.67
BCKDHBP21953 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.22■□□□□ 0.67
BCKDHBP21953 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHBP21953 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BCKDHBP21953 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHBP21953 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHBP21953 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.21■□□□□ 0.67
BCKDHBP21953 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.21■□□□□ 0.67
BCKDHBP21953 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHBP21953 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.21■□□□□ 0.67
BCKDHBP21953 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHBP21953 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHBP21953 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
BCKDHBP21953 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHBP21953 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.21■□□□□ 0.67
BCKDHBP21953 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.21■□□□□ 0.67
BCKDHBP21953 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHBP21953 AC012313.10-201ENST00000623509 926 ntBASIC19.21■□□□□ 0.67
BCKDHBP21953 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.21■□□□□ 0.67
BCKDHBP21953 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
BCKDHBP21953 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHBP21953 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHBP21953 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHBP21953 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHBP21953 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHBP21953 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHBP21953 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHBP21953 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHBP21953 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHBP21953 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHBP21953 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHBP21953 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHBP21953 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHBP21953 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.2■□□□□ 0.66
BCKDHBP21953 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.2■□□□□ 0.66
BCKDHBP21953 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.2■□□□□ 0.66
BCKDHBP21953 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.2■□□□□ 0.66
BCKDHBP21953 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.2■□□□□ 0.66
BCKDHBP21953 AL136038.3-201ENST00000561909 1096 ntBASIC19.2■□□□□ 0.66
BCKDHBP21953 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.2■□□□□ 0.66
BCKDHBP21953 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHBP21953 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.2■□□□□ 0.66
BCKDHBP21953 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms