Protein–RNA interactions for Protein: P17706

PTPN2, Tyrosine-protein phosphatase non-receptor type 2, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2P17706 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN2P17706 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN2P17706 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN2P17706 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN2P17706 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN2P17706 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN2P17706 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN2P17706 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTPN2P17706 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN2P17706 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN2P17706 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN2P17706 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.25■□□□□ 0.83
PTPN2P17706 COX11P1-201ENST00000489116 835 ntBASIC20.25■□□□□ 0.83
PTPN2P17706 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.25■□□□□ 0.83
PTPN2P17706 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN2P17706 AL512604.3-201ENST00000569583 964 ntBASIC20.25■□□□□ 0.83
PTPN2P17706 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN2P17706 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN2P17706 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN2P17706 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN2P17706 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN2P17706 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
PTPN2P17706 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 LINC01465-201ENST00000408887 1940 ntBASIC20.24■□□□□ 0.83
PTPN2P17706 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN2P17706 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.24■□□□□ 0.83
PTPN2P17706 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN2P17706 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN2P17706 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN2P17706 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
PTPN2P17706 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
PTPN2P17706 AC141257.4-201ENST00000634557 245 ntBASIC20.24■□□□□ 0.83
PTPN2P17706 AC136944.6-201ENST00000634818 245 ntBASIC20.24■□□□□ 0.83
PTPN2P17706 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.24■□□□□ 0.83
PTPN2P17706 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PTPN2P17706 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN2P17706 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PTPN2P17706 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN2P17706 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN2P17706 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN2P17706 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN2P17706 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN2P17706 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN2P17706 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN2P17706 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN2P17706 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN2P17706 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN2P17706 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN2P17706 FAM8A6P-201ENST00000407496 1135 ntBASIC20.23■□□□□ 0.83
PTPN2P17706 TSPY5P-201ENST00000426936 936 ntBASIC20.23■□□□□ 0.83
PTPN2P17706 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN2P17706 YBX1P2-201ENST00000489612 999 ntBASIC20.23■□□□□ 0.83
PTPN2P17706 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN2P17706 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN2P17706 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN2P17706 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN2P17706 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PTPN2P17706 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PTPN2P17706 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN2P17706 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN2P17706 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN2P17706 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN2P17706 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN2P17706 CKBP1-201ENST00000565489 1086 ntBASIC20.22■□□□□ 0.83
PTPN2P17706 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PTPN2P17706 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN2P17706 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN2P17706 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN2P17706 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN2P17706 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN2P17706 AC009237.14-201ENST00000609975 1594 ntBASIC20.21■□□□□ 0.83
PTPN2P17706 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms