Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.95■□□□□ 0.46
UBL4AP11441 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 LTB4R2-202ENST00000528054 3092 ntBASIC17.95■□□□□ 0.46
UBL4AP11441 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
UBL4AP11441 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.95■□□□□ 0.46
UBL4AP11441 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.95■□□□□ 0.46
UBL4AP11441 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.94■□□□□ 0.46
UBL4AP11441 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.94■□□□□ 0.46
UBL4AP11441 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UBL4AP11441 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.94■□□□□ 0.46
UBL4AP11441 KRT17P3-201ENST00000420566 1262 ntBASIC17.94■□□□□ 0.46
UBL4AP11441 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.94■□□□□ 0.46
UBL4AP11441 YBX1P10-201ENST00000444752 975 ntBASIC17.94■□□□□ 0.46
UBL4AP11441 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
UBL4AP11441 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.94■□□□□ 0.46
UBL4AP11441 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 PRKY-204ENST00000533551 1019 ntBASIC17.94■□□□□ 0.46
UBL4AP11441 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.94■□□□□ 0.46
UBL4AP11441 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.94■□□□□ 0.46
UBL4AP11441 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.94■□□□□ 0.46
UBL4AP11441 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.94■□□□□ 0.46
UBL4AP11441 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
UBL4AP11441 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBL4AP11441 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.93■□□□□ 0.46
UBL4AP11441 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.93■□□□□ 0.46
UBL4AP11441 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.93■□□□□ 0.46
UBL4AP11441 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.93■□□□□ 0.46
UBL4AP11441 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.93■□□□□ 0.46
UBL4AP11441 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.93■□□□□ 0.46
UBL4AP11441 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 CD99P1-205ENST00000527459 561 ntBASIC17.93■□□□□ 0.46
UBL4AP11441 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.93■□□□□ 0.46
UBL4AP11441 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBL4AP11441 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBL4AP11441 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.93■□□□□ 0.46
UBL4AP11441 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBL4AP11441 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.93■□□□□ 0.46
UBL4AP11441 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL4AP11441 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
UBL4AP11441 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.92■□□□□ 0.46
UBL4AP11441 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBL4AP11441 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBL4AP11441 ESRRAP1-201ENST00000400596 1257 ntBASIC17.92■□□□□ 0.46
UBL4AP11441 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL4AP11441 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.92■□□□□ 0.46
UBL4AP11441 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms