Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
UBCP0CG48 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBCP0CG48 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBCP0CG48 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.02■□□□□ 0.32
UBCP0CG48 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 AL162430.1-201ENST00000480705 870 ntBASIC17.02■□□□□ 0.32
UBCP0CG48 MIR5787-201ENST00000611784 55 ntBASIC17.02■□□□□ 0.32
UBCP0CG48 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.02■□□□□ 0.32
UBCP0CG48 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.02■□□□□ 0.32
UBCP0CG48 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
UBCP0CG48 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UBCP0CG48 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UBCP0CG48 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
UBCP0CG48 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
UBCP0CG48 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBCP0CG48 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBCP0CG48 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.02■□□□□ 0.31
UBCP0CG48 AC090340.1-201ENST00000620778 4980 ntBASIC17.02■□□□□ 0.31
UBCP0CG48 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBCP0CG48 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBCP0CG48 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.02■□□□□ 0.31
UBCP0CG48 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.01■□□□□ 0.31
UBCP0CG48 NEFHP1-201ENST00000412845 2629 ntBASIC17.01■□□□□ 0.31
UBCP0CG48 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBCP0CG48 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBCP0CG48 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.01■□□□□ 0.31
UBCP0CG48 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
UBCP0CG48 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 AL390719.1-204ENST00000412397 1219 ntBASIC17.01■□□□□ 0.31
UBCP0CG48 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.01■□□□□ 0.31
UBCP0CG48 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 AC093503.3-201ENST00000624917 2352 ntBASIC17.01■□□□□ 0.31
UBCP0CG48 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBCP0CG48 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBCP0CG48 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17■□□□□ 0.31
UBCP0CG48 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 AC073210.2-201ENST00000430369 194 ntBASIC17■□□□□ 0.31
UBCP0CG48 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17■□□□□ 0.31
UBCP0CG48 TFP1-202ENST00000475455 1573 ntBASIC17■□□□□ 0.31
UBCP0CG48 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17■□□□□ 0.31
UBCP0CG48 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17■□□□□ 0.31
UBCP0CG48 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 MKRN4P-201ENST00000444706 1521 ntBASIC17■□□□□ 0.31
UBCP0CG48 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBCP0CG48 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBCP0CG48 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17■□□□□ 0.31
UBCP0CG48 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
UBCP0CG48 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.99■□□□□ 0.31
UBCP0CG48 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBCP0CG48 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms