Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.87■□□□□ 0.45
THBS1P07996 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
THBS1P07996 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
THBS1P07996 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS1P07996 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THBS1P07996 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THBS1P07996 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS1P07996 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.87■□□□□ 0.45
THBS1P07996 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS1P07996 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 AC104417.2-201ENST00000562989 1793 ntBASIC17.86■□□□□ 0.45
THBS1P07996 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 POU5F1P3-201ENST00000428824 1078 ntBASIC17.86■□□□□ 0.45
THBS1P07996 TUBB8P6-201ENST00000436895 1288 ntBASIC17.86■□□□□ 0.45
THBS1P07996 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.86■□□□□ 0.45
THBS1P07996 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.86■□□□□ 0.45
THBS1P07996 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
THBS1P07996 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS1P07996 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS1P07996 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
THBS1P07996 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.85■□□□□ 0.45
THBS1P07996 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.85■□□□□ 0.45
THBS1P07996 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
THBS1P07996 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 POM121L13P-201ENST00000422362 380 ntBASIC17.85■□□□□ 0.45
THBS1P07996 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
THBS1P07996 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 FAM201B-201ENST00000458407 597 ntBASIC17.85■□□□□ 0.45
THBS1P07996 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
THBS1P07996 UNC93B5-201ENST00000530315 699 ntBASIC17.85■□□□□ 0.45
THBS1P07996 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.85■□□□□ 0.45
THBS1P07996 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.85■□□□□ 0.45
THBS1P07996 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
THBS1P07996 ITM2C-210ENST00000620962 501 ntBASIC17.85■□□□□ 0.45
THBS1P07996 TEX21P-204ENST00000641479 1693 ntBASIC17.85■□□□□ 0.45
THBS1P07996 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
THBS1P07996 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.84■□□□□ 0.45
THBS1P07996 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.84■□□□□ 0.45
THBS1P07996 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
THBS1P07996 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.84■□□□□ 0.45
THBS1P07996 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.84■□□□□ 0.45
THBS1P07996 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS1P07996 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS1P07996 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
THBS1P07996 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms