Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.44■□□□□ 0.38
GYPBP06028 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.44■□□□□ 0.38
GYPBP06028 NEFHP1-201ENST00000412845 2629 ntBASIC17.44■□□□□ 0.38
GYPBP06028 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GYPBP06028 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GYPBP06028 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 AL161938.1-201ENST00000569833 2180 ntBASIC17.43■□□□□ 0.38
GYPBP06028 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
GYPBP06028 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.43■□□□□ 0.38
GYPBP06028 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.43■□□□□ 0.38
GYPBP06028 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GYPBP06028 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GYPBP06028 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.42■□□□□ 0.38
GYPBP06028 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.42■□□□□ 0.38
GYPBP06028 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GYPBP06028 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 MIR663A-201ENST00000385250 93 ntBASIC17.42■□□□□ 0.38
GYPBP06028 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.42■□□□□ 0.38
GYPBP06028 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
GYPBP06028 AF201337.1-201ENST00000520239 748 ntBASIC17.42■□□□□ 0.38
GYPBP06028 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GYPBP06028 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.42■□□□□ 0.38
GYPBP06028 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.42■□□□□ 0.38
GYPBP06028 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GYPBP06028 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GYPBP06028 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GYPBP06028 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
GYPBP06028 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 TFP1-202ENST00000475455 1573 ntBASIC17.41■□□□□ 0.38
GYPBP06028 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.41■□□□□ 0.38
GYPBP06028 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 CDCA4P2-201ENST00000441182 718 ntBASIC17.41■□□□□ 0.38
GYPBP06028 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.41■□□□□ 0.38
GYPBP06028 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.41■□□□□ 0.38
GYPBP06028 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.41■□□□□ 0.38
GYPBP06028 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.41■□□□□ 0.38
GYPBP06028 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 TEX21P-204ENST00000641479 1693 ntBASIC17.41■□□□□ 0.38
GYPBP06028 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
GYPBP06028 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GYPBP06028 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GYPBP06028 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms