Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.32■■□□□ 1.32
APPP05067 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.31■■□□□ 1.32
APPP05067 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.31■■□□□ 1.32
APPP05067 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
APPP05067 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.31■■□□□ 1.32
APPP05067 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
APPP05067 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.31■■□□□ 1.32
APPP05067 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
APPP05067 FAM197Y1-201ENST00000421178 764 ntBASIC23.31■■□□□ 1.32
APPP05067 TSPY7P-201ENST00000431358 1114 ntBASIC23.31■■□□□ 1.32
APPP05067 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.31■■□□□ 1.32
APPP05067 AC073195.1-201ENST00000607241 877 ntBASIC23.31■■□□□ 1.32
APPP05067 AC113410.3-201ENST00000623366 203 ntBASIC23.31■■□□□ 1.32
APPP05067 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.31■■□□□ 1.32
APPP05067 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
APPP05067 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
APPP05067 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
APPP05067 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APPP05067 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
APPP05067 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.31■■□□□ 1.32
APPP05067 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.31■■□□□ 1.32
APPP05067 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.3■■□□□ 1.32
APPP05067 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
APPP05067 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.3■■□□□ 1.32
APPP05067 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.3■■□□□ 1.32
APPP05067 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.3■■□□□ 1.32
APPP05067 CR392000.1-201ENST00000624770 1228 ntBASIC23.3■■□□□ 1.32
APPP05067 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APPP05067 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.3■■□□□ 1.32
APPP05067 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.3■■□□□ 1.32
APPP05067 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
APPP05067 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 NIFKP9-201ENST00000419265 221 ntBASIC23.29■■□□□ 1.32
APPP05067 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
APPP05067 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.29■■□□□ 1.32
APPP05067 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 CD177P1-201ENST00000606252 935 ntBASIC23.29■■□□□ 1.32
APPP05067 AL353708.3-201ENST00000610272 989 ntBASIC23.29■■□□□ 1.32
APPP05067 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.29■■□□□ 1.32
APPP05067 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.29■■□□□ 1.32
APPP05067 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.29■■□□□ 1.32
APPP05067 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
APPP05067 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
APPP05067 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.28■■□□□ 1.32
APPP05067 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.28■■□□□ 1.32
APPP05067 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.28■■□□□ 1.32
APPP05067 MIR4497-201ENST00000583208 89 ntBASIC23.28■■□□□ 1.32
APPP05067 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.28■■□□□ 1.32
APPP05067 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.28■■□□□ 1.32
APPP05067 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
APPP05067 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
APPP05067 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
APPP05067 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.27■■□□□ 1.32
APPP05067 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 AC125437.2-201ENST00000625180 2167 ntBASIC23.27■■□□□ 1.32
APPP05067 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
APPP05067 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
APPP05067 KSR1P1-201ENST00000446298 240 ntBASIC23.27■■□□□ 1.32
APPP05067 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.27■■□□□ 1.32
APPP05067 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.27■■□□□ 1.32
APPP05067 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.27■■□□□ 1.32
APPP05067 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APPP05067 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms