Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
MT-ND1P03886 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND1P03886 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MT-ND1P03886 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 AL133373.2-201ENST00000623187 2828 ntBASIC18.31■□□□□ 0.52
MT-ND1P03886 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MT-ND1P03886 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
MT-ND1P03886 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MT-ND1P03886 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.3■□□□□ 0.52
MT-ND1P03886 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.3■□□□□ 0.52
MT-ND1P03886 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.3■□□□□ 0.52
MT-ND1P03886 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 AC016405.3-201ENST00000607710 860 ntBASIC18.3■□□□□ 0.52
MT-ND1P03886 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.3■□□□□ 0.52
MT-ND1P03886 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND1P03886 KRT8P20-201ENST00000423953 1409 ntBASIC18.3■□□□□ 0.52
MT-ND1P03886 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND1P03886 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND1P03886 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
MT-ND1P03886 AC016769.1-201ENST00000409132 1010 ntBASIC18.29■□□□□ 0.52
MT-ND1P03886 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.29■□□□□ 0.52
MT-ND1P03886 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.29■□□□□ 0.52
MT-ND1P03886 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND1P03886 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND1P03886 MFSD11-216ENST00000590393 1141 ntBASIC18.29■□□□□ 0.52
MT-ND1P03886 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND1P03886 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND1P03886 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
MT-ND1P03886 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.29■□□□□ 0.52
MT-ND1P03886 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND1P03886 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND1P03886 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.29■□□□□ 0.52
MT-ND1P03886 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND1P03886 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MT-ND1P03886 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND1P03886 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
MT-ND1P03886 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MT-ND1P03886 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.28■□□□□ 0.52
MT-ND1P03886 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MT-ND1P03886 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND1P03886 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
MT-ND1P03886 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND1P03886 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND1P03886 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.28■□□□□ 0.52
MT-ND1P03886 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MT-ND1P03886 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.27■□□□□ 0.52
MT-ND1P03886 PHGDH-210ENST00000641115 1638 ntBASIC18.27■□□□□ 0.52
MT-ND1P03886 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.27■□□□□ 0.52
MT-ND1P03886 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.27■□□□□ 0.52
MT-ND1P03886 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
MT-ND1P03886 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms