Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.22■■□□□ 1.15
ALDH1A1P00352 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ALDH1A1P00352 FP700111.2-201ENST00000619190 1892 ntBASIC22.22■■□□□ 1.15
ALDH1A1P00352 AP002383.4-201ENST00000442518 975 ntBASIC22.22■■□□□ 1.15
ALDH1A1P00352 EMBP1-201ENST00000458200 901 ntBASIC22.22■■□□□ 1.15
ALDH1A1P00352 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ALDH1A1P00352 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
ALDH1A1P00352 AC104692.2-201ENST00000603054 253 ntBASIC22.22■■□□□ 1.15
ALDH1A1P00352 AL031008.1-201ENST00000619963 541 ntBASIC22.22■■□□□ 1.15
ALDH1A1P00352 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
ALDH1A1P00352 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.22■■□□□ 1.15
ALDH1A1P00352 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ALDH1A1P00352 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
ALDH1A1P00352 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ALDH1A1P00352 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.21■■□□□ 1.15
ALDH1A1P00352 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.21■■□□□ 1.15
ALDH1A1P00352 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.21■■□□□ 1.15
ALDH1A1P00352 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 TSPY19P-201ENST00000418461 509 ntBASIC22.21■■□□□ 1.15
ALDH1A1P00352 TSPY18P-201ENST00000441642 509 ntBASIC22.21■■□□□ 1.15
ALDH1A1P00352 AP002414.4-201ENST00000589764 1148 ntBASIC22.21■■□□□ 1.15
ALDH1A1P00352 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.21■■□□□ 1.15
ALDH1A1P00352 AL121772.3-201ENST00000610840 674 ntBASIC22.21■■□□□ 1.15
ALDH1A1P00352 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.21■■□□□ 1.15
ALDH1A1P00352 PLK5-205ENST00000642079 1969 ntBASIC22.21■■□□□ 1.15
ALDH1A1P00352 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.21■■□□□ 1.15
ALDH1A1P00352 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ALDH1A1P00352 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
ALDH1A1P00352 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.2■■□□□ 1.15
ALDH1A1P00352 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.2■■□□□ 1.14
ALDH1A1P00352 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 AC092597.1-201ENST00000487352 616 ntBASIC22.2■■□□□ 1.14
ALDH1A1P00352 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.2■■□□□ 1.14
ALDH1A1P00352 KRT8P26-201ENST00000534154 1276 ntBASIC22.2■■□□□ 1.14
ALDH1A1P00352 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.2■■□□□ 1.14
ALDH1A1P00352 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
ALDH1A1P00352 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.2■■□□□ 1.14
ALDH1A1P00352 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ALDH1A1P00352 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ALDH1A1P00352 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ALDH1A1P00352 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.19■■□□□ 1.14
ALDH1A1P00352 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ALDH1A1P00352 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.19■■□□□ 1.14
ALDH1A1P00352 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 AC091304.2-201ENST00000564639 760 ntBASIC22.18■■□□□ 1.14
ALDH1A1P00352 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.18■■□□□ 1.14
ALDH1A1P00352 AC233723.2-201ENST00000623798 2106 ntBASIC22.18■■□□□ 1.14
ALDH1A1P00352 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ALDH1A1P00352 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms