Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCAF4O95104 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCAF4O95104 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCAF4O95104 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SCAF4O95104 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 KRT16P6-202ENST00000425692 1426 ntBASIC15.88■□□□□ 0.13
SCAF4O95104 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SCAF4O95104 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SCAF4O95104 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.88■□□□□ 0.13
SCAF4O95104 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.88■□□□□ 0.13
SCAF4O95104 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.88■□□□□ 0.13
SCAF4O95104 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.88■□□□□ 0.13
SCAF4O95104 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.88■□□□□ 0.13
SCAF4O95104 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.88■□□□□ 0.13
SCAF4O95104 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.88■□□□□ 0.13
SCAF4O95104 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.88■□□□□ 0.13
SCAF4O95104 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCAF4O95104 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.87■□□□□ 0.13
SCAF4O95104 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.87■□□□□ 0.13
SCAF4O95104 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 AC020916.1-201ENST00000587762 1774 ntBASIC15.87■□□□□ 0.13
SCAF4O95104 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.87■□□□□ 0.13
SCAF4O95104 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCAF4O95104 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.86■□□□□ 0.13
SCAF4O95104 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.86■□□□□ 0.13
SCAF4O95104 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.86■□□□□ 0.13
SCAF4O95104 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.86■□□□□ 0.13
SCAF4O95104 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SCAF4O95104 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.86■□□□□ 0.13
SCAF4O95104 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 AC004911.1-201ENST00000416316 871 ntBASIC15.86■□□□□ 0.13
SCAF4O95104 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.86■□□□□ 0.13
SCAF4O95104 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.86■□□□□ 0.13
SCAF4O95104 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.86■□□□□ 0.13
SCAF4O95104 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.86■□□□□ 0.13
SCAF4O95104 OR6D1P-202ENST00000641007 5290 ntBASIC15.86■□□□□ 0.13
SCAF4O95104 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SCAF4O95104 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.86■□□□□ 0.13
SCAF4O95104 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SCAF4O95104 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.86■□□□□ 0.13
SCAF4O95104 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SCAF4O95104 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
SCAF4O95104 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAF4O95104 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.85■□□□□ 0.13
SCAF4O95104 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAF4O95104 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.85■□□□□ 0.13
SCAF4O95104 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SCAF4O95104 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SCAF4O95104 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAF4O95104 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAF4O95104 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SCAF4O95104 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms