Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 AC110285.5-201ENST00000611501 352 ntBASIC18.1■□□□□ 0.49
TRIM3O75382 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM3O75382 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM3O75382 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TRIM3O75382 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM3O75382 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.09■□□□□ 0.49
TRIM3O75382 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TRIM3O75382 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM3O75382 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM3O75382 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM3O75382 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
TRIM3O75382 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM3O75382 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRIM3O75382 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM3O75382 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.08■□□□□ 0.49
TRIM3O75382 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRIM3O75382 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM3O75382 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM3O75382 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM3O75382 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM3O75382 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM3O75382 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM3O75382 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM3O75382 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM3O75382 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM3O75382 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRIM3O75382 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM3O75382 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM3O75382 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM3O75382 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRIM3O75382 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM3O75382 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM3O75382 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM3O75382 BX119927.1-201ENST00000636596 1552 ntBASIC18.07■□□□□ 0.48
TRIM3O75382 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM3O75382 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM3O75382 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM3O75382 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM3O75382 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM3O75382 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM3O75382 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM3O75382 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM3O75382 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TRIM3O75382 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms