Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXD2O60548 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXD2O60548 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXD2O60548 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
FOXD2O60548 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXD2O60548 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.54■□□□□ 0.72
FOXD2O60548 AC026471.6-201ENST00000622954 1905 ntBASIC19.54■□□□□ 0.72
FOXD2O60548 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXD2O60548 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXD2O60548 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXD2O60548 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXD2O60548 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
FOXD2O60548 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
FOXD2O60548 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXD2O60548 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 MESTP1-201ENST00000404287 994 ntBASIC19.53■□□□□ 0.72
FOXD2O60548 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXD2O60548 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXD2O60548 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
FOXD2O60548 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 AC139887.4-201ENST00000607877 719 ntBASIC19.53■□□□□ 0.72
FOXD2O60548 AL138966.2-201ENST00000621997 464 ntBASIC19.53■□□□□ 0.72
FOXD2O60548 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXD2O60548 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXD2O60548 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXD2O60548 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXD2O60548 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
FOXD2O60548 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.52■□□□□ 0.72
FOXD2O60548 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
FOXD2O60548 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
FOXD2O60548 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXD2O60548 YBX1P2-201ENST00000489612 999 ntBASIC19.52■□□□□ 0.72
FOXD2O60548 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXD2O60548 C1QL1P1-201ENST00000568105 661 ntBASIC19.52■□□□□ 0.72
FOXD2O60548 AC010653.2-201ENST00000623505 997 ntBASIC19.52■□□□□ 0.72
FOXD2O60548 AC131212.4-201ENST00000623606 975 ntBASIC19.52■□□□□ 0.72
FOXD2O60548 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
FOXD2O60548 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXD2O60548 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXD2O60548 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXD2O60548 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
FOXD2O60548 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXD2O60548 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXD2O60548 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.51■□□□□ 0.71
FOXD2O60548 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXD2O60548 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 SLC25A1P2-201ENST00000430693 912 ntBASIC19.51■□□□□ 0.71
FOXD2O60548 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.51■□□□□ 0.71
FOXD2O60548 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
FOXD2O60548 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXD2O60548 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXD2O60548 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXD2O60548 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.51■□□□□ 0.71
FOXD2O60548 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXD2O60548 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXD2O60548 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXD2O60548 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXD2O60548 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FOXD2O60548 FEM1AP1-201ENST00000431297 1995 ntBASIC19.5■□□□□ 0.71
FOXD2O60548 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXD2O60548 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXD2O60548 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXD2O60548 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms