Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VEGFDO43915 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
VEGFDO43915 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.1■□□□□ 0.65
VEGFDO43915 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
VEGFDO43915 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VEGFDO43915 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.1■□□□□ 0.65
VEGFDO43915 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.1■□□□□ 0.65
VEGFDO43915 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.1■□□□□ 0.65
VEGFDO43915 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VEGFDO43915 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.1■□□□□ 0.65
VEGFDO43915 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 FSCN1P1-201ENST00000568912 1481 ntBASIC19.09■□□□□ 0.65
VEGFDO43915 AC125437.2-201ENST00000625180 2167 ntBASIC19.09■□□□□ 0.65
VEGFDO43915 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.09■□□□□ 0.65
VEGFDO43915 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VEGFDO43915 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.09■□□□□ 0.65
VEGFDO43915 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.09■□□□□ 0.65
VEGFDO43915 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VEGFDO43915 ZNF815P-204ENST00000434898 1737 ntBASIC19.08■□□□□ 0.65
VEGFDO43915 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VEGFDO43915 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.08■□□□□ 0.65
VEGFDO43915 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.08■□□□□ 0.65
VEGFDO43915 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VEGFDO43915 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VEGFDO43915 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VEGFDO43915 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VEGFDO43915 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.08■□□□□ 0.64
VEGFDO43915 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.08■□□□□ 0.64
VEGFDO43915 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.08■□□□□ 0.64
VEGFDO43915 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
VEGFDO43915 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.08■□□□□ 0.64
VEGFDO43915 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.08■□□□□ 0.64
VEGFDO43915 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.08■□□□□ 0.64
VEGFDO43915 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VEGFDO43915 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.08■□□□□ 0.64
VEGFDO43915 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.08■□□□□ 0.64
VEGFDO43915 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.08■□□□□ 0.64
VEGFDO43915 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VEGFDO43915 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.08■□□□□ 0.64
VEGFDO43915 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VEGFDO43915 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VEGFDO43915 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VEGFDO43915 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VEGFDO43915 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.07■□□□□ 0.64
VEGFDO43915 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.07■□□□□ 0.64
VEGFDO43915 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.07■□□□□ 0.64
VEGFDO43915 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.07■□□□□ 0.64
VEGFDO43915 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.07■□□□□ 0.64
VEGFDO43915 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VEGFDO43915 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 REXO1L10P-201ENST00000615707 1290 ntBASIC19.07■□□□□ 0.64
VEGFDO43915 MIR6786-201ENST00000616843 113 ntBASIC19.07■□□□□ 0.64
VEGFDO43915 REXO1L12P-201ENST00000622156 912 ntBASIC19.07■□□□□ 0.64
VEGFDO43915 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.07■□□□□ 0.64
VEGFDO43915 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VEGFDO43915 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.07■□□□□ 0.64
VEGFDO43915 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.07■□□□□ 0.64
VEGFDO43915 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VEGFDO43915 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.06■□□□□ 0.64
VEGFDO43915 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
VEGFDO43915 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.06■□□□□ 0.64
VEGFDO43915 Z85996.1-201ENST00000494644 937 ntBASIC19.06■□□□□ 0.64
VEGFDO43915 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.06■□□□□ 0.64
VEGFDO43915 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
VEGFDO43915 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VEGFDO43915 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
VEGFDO43915 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VEGFDO43915 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VEGFDO43915 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.05■□□□□ 0.64
VEGFDO43915 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms