Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LINC01465-201ENST00000408887 1940 ntBASIC20.82■□□□□ 0.92
HOXA2O43364 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXA2O43364 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXA2O43364 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXA2O43364 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HOXA2O43364 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXA2O43364 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXA2O43364 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXA2O43364 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.81■□□□□ 0.92
HOXA2O43364 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HOXA2O43364 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXA2O43364 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXA2O43364 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.8■□□□□ 0.92
HOXA2O43364 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXA2O43364 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.8■□□□□ 0.92
HOXA2O43364 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 AP000523.1-201ENST00000398242 1049 ntBASIC20.8■□□□□ 0.92
HOXA2O43364 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXA2O43364 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXA2O43364 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXA2O43364 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXA2O43364 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXA2O43364 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXA2O43364 AC140113.3-201ENST00000605663 199 ntBASIC20.8■□□□□ 0.92
HOXA2O43364 AC011558.1-201ENST00000623459 338 ntBASIC20.8■□□□□ 0.92
HOXA2O43364 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HOXA2O43364 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXA2O43364 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA2O43364 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
HOXA2O43364 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXA2O43364 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXA2O43364 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
HOXA2O43364 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HOXA2O43364 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HOXA2O43364 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HOXA2O43364 AL031133.1-201ENST00000406807 723 ntBASIC20.79■□□□□ 0.92
HOXA2O43364 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXA2O43364 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXA2O43364 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXA2O43364 AP003041.3-201ENST00000527151 707 ntBASIC20.79■□□□□ 0.92
HOXA2O43364 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXA2O43364 AL358472.4-201ENST00000633140 710 ntBASIC20.79■□□□□ 0.92
HOXA2O43364 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXA2O43364 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA2O43364 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXA2O43364 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXA2O43364 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA2O43364 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA2O43364 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA2O43364 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXA2O43364 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 UPK3BP1-201ENST00000428678 509 ntBASIC20.78■□□□□ 0.92
HOXA2O43364 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA2O43364 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA2O43364 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.78■□□□□ 0.92
HOXA2O43364 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA2O43364 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXA2O43364 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA2O43364 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HOXA2O43364 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms