Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SMAD9O15198 AL359736.2-201ENST00000621992 437 ntBASIC17.61■□□□□ 0.41
SMAD9O15198 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.61■□□□□ 0.41
SMAD9O15198 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD9O15198 AL020996.1-203ENST00000536896 2307 ntBASIC17.61■□□□□ 0.41
SMAD9O15198 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMAD9O15198 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMAD9O15198 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.61■□□□□ 0.41
SMAD9O15198 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.61■□□□□ 0.41
SMAD9O15198 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD9O15198 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMAD9O15198 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.6■□□□□ 0.41
SMAD9O15198 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMAD9O15198 GCSHP5-201ENST00000443090 522 ntBASIC17.6■□□□□ 0.41
SMAD9O15198 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SMAD9O15198 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.6■□□□□ 0.41
SMAD9O15198 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.6■□□□□ 0.41
SMAD9O15198 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.6■□□□□ 0.41
SMAD9O15198 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.6■□□□□ 0.41
SMAD9O15198 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 AP006587.1-201ENST00000534129 1502 ntBASIC17.6■□□□□ 0.41
SMAD9O15198 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD9O15198 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMAD9O15198 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD9O15198 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 TMEM179-206ENST00000616017 1645 ntBASIC17.59■□□□□ 0.41
SMAD9O15198 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 AC133681.1-201ENST00000465482 601 ntBASIC17.59■□□□□ 0.41
SMAD9O15198 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD9O15198 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 AC142381.4-202ENST00000563973 229 ntBASIC17.59■□□□□ 0.41
SMAD9O15198 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD9O15198 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SMAD9O15198 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMAD9O15198 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD9O15198 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD9O15198 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD9O15198 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SMAD9O15198 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD9O15198 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD9O15198 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SMAD9O15198 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD9O15198 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD9O15198 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.58■□□□□ 0.41
SMAD9O15198 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD9O15198 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SMAD9O15198 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD9O15198 NBPF21P-201ENST00000425093 1451 ntBASIC17.58■□□□□ 0.41
SMAD9O15198 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SMAD9O15198 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD9O15198 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms