Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 FEM1AP4-201ENST00000443167 1987 ntBASIC18.79■□□□□ 0.6
CDX4O14627 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.78■□□□□ 0.6
CDX4O14627 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDX4O14627 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDX4O14627 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDX4O14627 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDX4O14627 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.78■□□□□ 0.6
CDX4O14627 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.78■□□□□ 0.6
CDX4O14627 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.78■□□□□ 0.6
CDX4O14627 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDX4O14627 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDX4O14627 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.78■□□□□ 0.6
CDX4O14627 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.78■□□□□ 0.6
CDX4O14627 AC092720.2-201ENST00000602388 1665 ntBASIC18.78■□□□□ 0.6
CDX4O14627 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.78■□□□□ 0.6
CDX4O14627 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDX4O14627 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDX4O14627 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDX4O14627 TSSC2-201ENST00000450217 709 ntBASIC18.77■□□□□ 0.6
CDX4O14627 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.77■□□□□ 0.6
CDX4O14627 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.77■□□□□ 0.6
CDX4O14627 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.77■□□□□ 0.6
CDX4O14627 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.77■□□□□ 0.6
CDX4O14627 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDX4O14627 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDX4O14627 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.77■□□□□ 0.6
CDX4O14627 AC006538.3-201ENST00000612495 578 ntBASIC18.77■□□□□ 0.6
CDX4O14627 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CDX4O14627 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDX4O14627 AC016734.2-201ENST00000624325 1377 ntBASIC18.77■□□□□ 0.6
CDX4O14627 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDX4O14627 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.77■□□□□ 0.59
CDX4O14627 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDX4O14627 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.76■□□□□ 0.59
CDX4O14627 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.76■□□□□ 0.59
CDX4O14627 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
CDX4O14627 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
CDX4O14627 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDX4O14627 AC092597.1-201ENST00000487352 616 ntBASIC18.76■□□□□ 0.59
CDX4O14627 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.76■□□□□ 0.59
CDX4O14627 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.76■□□□□ 0.59
CDX4O14627 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.76■□□□□ 0.59
CDX4O14627 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.76■□□□□ 0.59
CDX4O14627 AC023511.2-201ENST00000618803 211 ntBASIC18.76■□□□□ 0.59
CDX4O14627 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 AC007225.1-201ENST00000566331 1836 ntBASIC18.76■□□□□ 0.59
CDX4O14627 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.76■□□□□ 0.59
CDX4O14627 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDX4O14627 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.75■□□□□ 0.59
CDX4O14627 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDX4O14627 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
CDX4O14627 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.75■□□□□ 0.59
CDX4O14627 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.75■□□□□ 0.59
CDX4O14627 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 AP002383.4-201ENST00000442518 975 ntBASIC18.75■□□□□ 0.59
CDX4O14627 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.75■□□□□ 0.59
CDX4O14627 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.75■□□□□ 0.59
CDX4O14627 AC004263.2-201ENST00000617183 678 ntBASIC18.75■□□□□ 0.59
CDX4O14627 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.75■□□□□ 0.59
CDX4O14627 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDX4O14627 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDX4O14627 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.74■□□□□ 0.59
CDX4O14627 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.74■□□□□ 0.59
CDX4O14627 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.74■□□□□ 0.59
CDX4O14627 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.74■□□□□ 0.59
CDX4O14627 AC006128.1-201ENST00000624704 1661 ntBASIC18.74■□□□□ 0.59
CDX4O14627 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.74■□□□□ 0.59
CDX4O14627 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.74■□□□□ 0.59
CDX4O14627 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.74■□□□□ 0.59
CDX4O14627 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.74■□□□□ 0.59
CDX4O14627 AC009078.2-202ENST00000463353 338 ntBASIC18.74■□□□□ 0.59
CDX4O14627 AC011498.5-201ENST00000592027 486 ntBASIC18.74■□□□□ 0.59
CDX4O14627 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.74■□□□□ 0.59
CDX4O14627 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.74■□□□□ 0.59
CDX4O14627 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.74■□□□□ 0.59
CDX4O14627 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.74■□□□□ 0.59
CDX4O14627 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDX4O14627 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
CDX4O14627 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CDX4O14627 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 BX119927.1-201ENST00000636596 1552 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms