Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA3F8WFD2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA3F8WFD2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
NPIPA3F8WFD2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA3F8WFD2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA3F8WFD2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 TFP1-202ENST00000475455 1573 ntBASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 AL691432.2-201ENST00000607222 2038 ntBASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 UNC93B2-201ENST00000285383 730 ntBASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 RBM17P1-201ENST00000453646 1190 ntBASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 PHGDH-210ENST00000641115 1638 ntBASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 KRT16P1-201ENST00000399124 1418 ntBASIC17.71■□□□□ 0.43
NPIPA3F8WFD2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
NPIPA3F8WFD2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NPIPA3F8WFD2 HCG11-201ENST00000411553 5696 ntBASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA3F8WFD2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 MIR1224-201ENST00000408193 85 ntBASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 AP000525.1-201ENST00000608286 694 ntBASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 AC097493.4-201ENST00000641197 219 ntBASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NPIPA3F8WFD2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 MIR1238-201ENST00000408483 83 ntBASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA3F8WFD2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms