Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 AC026471.5-201ENST00000615068 467 ntBASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YJEFN3A6XGL0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 ZNF815P-204ENST00000434898 1737 ntBASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 NUDT16P1-203ENST00000513809 620 ntBASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 MIR4785-201ENST00000585005 73 ntBASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 AC131212.4-201ENST00000623606 975 ntBASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 AL031985.4-201ENST00000642138 673 ntBASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
YJEFN3A6XGL0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 AC104417.2-201ENST00000562989 1793 ntBASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 AL355355.2-201ENST00000442321 338 ntBASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 AP003071.4-201ENST00000562276 1284 ntBASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 AL160286.2-201ENST00000567150 934 ntBASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
YJEFN3A6XGL0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
YJEFN3A6XGL0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
YJEFN3A6XGL0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
YJEFN3A6XGL0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 Z85996.1-201ENST00000494644 937 ntBASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
YJEFN3A6XGL0 SLC25A24-204ENST00000569674 2357 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms